BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E09SP1|AL425140
(190 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 371 e-103
>3x_Contig1619
Length = 7770
Score = 371 bits (186), Expect = e-103
Identities = 187/188 (99%)
Strand = Plus / Minus
Query: 1 gatcaatataattattagctctcttagcttaatggttaaagcctaatacttctaatatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6420 gatcaatataattattagctctcttagcttaatggttaaagcctaatacttctaatatta 6361
Query: 61 agattctatgttcgagtcatagagagagtattatattataaaamtaatataggtataagt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6360 agattctatgttcgagtcatagagagagtattatattataaaaataatataggtataagt 6301
Query: 121 taattggtaaactgaatgtcttccaaacattgaatgcgagttcaagtctcgctacctata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6300 taattggtaaactgaatgtcttccaaacattgaatgcgagttcaagtctcgctacctata 6241
Query: 181 atatatat 188
||||||||
Sbjct: 6240 atatatat 6233
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1428
Number of Sequences: 1807
Number of extensions: 1428
Number of successful extensions: 105
Number of sequences better than 1.0e-20: 1
length of query: 190
length of database: 10,358,551
effective HSP length: 15
effective length of query: 175
effective length of database: 10,331,446
effective search space: 1808003050
effective search space used: 1808003050
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.3 bits)